Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Chmp4bQ9D8B3 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Gm6621-201ENSMUST00000193251 772 ntBASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Gm38266-201ENSMUST00000194931 421 ntBASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Chmp4bQ9D8B3 Gm6189-201ENSMUST00000164487 2082 ntBASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Gm29100-201ENSMUST00000187564 4410 ntBASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Gm2991-201ENSMUST00000173338 480 ntBASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Gm45428-201ENSMUST00000209619 1789 ntBASIC15.24■□□□□ 0.03
Chmp4bQ9D8B3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Map1b-203ENSMUST00000223725 2669 ntBASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 AC154517.2-201ENSMUST00000220829 2458 ntBASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Glmp-201ENSMUST00000001454 1017 ntTSL 5 BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Gm19187-201ENSMUST00000206781 892 ntBASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.23■□□□□ 0.03
Chmp4bQ9D8B3 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms