Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Gm11964-201ENSMUST00000120982 444 ntBASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Mir6977-201ENSMUST00000184960 64 ntBASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.35□□□□□ -0.59
Chaf1bQ9D0N7 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Gm9083-201ENSMUST00000120423 819 ntBASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 AC069562.3-201ENSMUST00000225387 587 ntBASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Chaf1bQ9D0N7 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.59
Chaf1bQ9D0N7 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Chaf1bQ9D0N7 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chaf1bQ9D0N7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Chaf1bQ9D0N7 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chaf1bQ9D0N7 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chaf1bQ9D0N7 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Chaf1bQ9D0N7 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Chaf1bQ9D0N7 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms