Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.46□□□□□ -0.42
Snf8Q9CZ28 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Snf8Q9CZ28 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gm16177-201ENSMUST00000120728 718 ntBASIC12.45□□□□□ -0.42
Snf8Q9CZ28 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.45□□□□□ -0.42
Snf8Q9CZ28 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Snf8Q9CZ28 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Gm24934-201ENSMUST00000103764 111 ntBASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Gm4984-201ENSMUST00000115987 360 ntBASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Gm11591-201ENSMUST00000120063 702 ntBASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Gm17150-201ENSMUST00000165577 381 ntBASIC12.44□□□□□ -0.42
Snf8Q9CZ28 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snf8Q9CZ28 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 AC124397.2-201ENSMUST00000225575 2215 ntBASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snf8Q9CZ28 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms