Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm11918-201ENSMUST00000121660 179 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm14441-201ENSMUST00000121960 540 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm27892-201ENSMUST00000185017 106 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm17931-201ENSMUST00000208132 634 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 AC153961.1-201ENSMUST00000217760 385 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm10268-201ENSMUST00000085340 555 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm28719-201ENSMUST00000187779 1757 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Ssu72Q9CY97 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Gm38292-201ENSMUST00000192646 3045 ntBASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Gm27023-201ENSMUST00000182372 285 ntBASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.98□□□□□ -0.49
Ssu72Q9CY97 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Ssu72Q9CY97 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Gm4984-201ENSMUST00000115987 360 ntBASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Gm15610-201ENSMUST00000120584 195 ntBASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Gm13570-201ENSMUST00000140763 309 ntBASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Rprl1-201ENSMUST00000158050 327 ntBASIC11.97□□□□□ -0.49
Ssu72Q9CY97 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Gm27486-201ENSMUST00000184923 80 ntBASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.97□□□□□ -0.49
Ssu72Q9CY97 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.97□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms