Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Gm7541-201ENSMUST00000118361 535 ntBASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Gm15036-201ENSMUST00000118880 400 ntBASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Gm26134-201ENSMUST00000178484 110 ntBASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Gm44315-201ENSMUST00000203041 219 ntBASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Gm18204-201ENSMUST00000209835 793 ntBASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cldnd1Q9CQX5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Gm12419-201ENSMUST00000116649 636 ntBASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Znhit6-206ENSMUST00000199033 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Gm11470-201ENSMUST00000118868 1475 ntBASIC12.34□□□□□ -0.43
Cldnd1Q9CQX5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.43
Cldnd1Q9CQX5 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Cldnd1Q9CQX5 Myo7a-203ENSMUST00000107127 6806 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms