Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.86□□□□□ -0.51
Trim16Q99PP9 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.86□□□□□ -0.51
Trim16Q99PP9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Gm43438-201ENSMUST00000198133 379 ntBASIC11.86□□□□□ -0.51
Trim16Q99PP9 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Gm45484-201ENSMUST00000210310 1141 ntBASIC11.86□□□□□ -0.51
Trim16Q99PP9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Gm8227-201ENSMUST00000223306 571 ntBASIC11.86□□□□□ -0.51
Trim16Q99PP9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 5330417C22Rik-202ENSMUST00000106625 5836 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.86□□□□□ -0.51
Trim16Q99PP9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim16Q99PP9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Trpm7-202ENSMUST00000103224 7107 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gm4986-201ENSMUST00000119731 549 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gm13875-201ENSMUST00000120162 282 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gm13297-201ENSMUST00000120205 934 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gm13315-201ENSMUST00000120376 991 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gm11597-201ENSMUST00000121423 964 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Rmrp-201ENSMUST00000157463 271 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gm27516-201ENSMUST00000184237 98 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 Mir8109-201ENSMUST00000184375 117 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 Morn2-202ENSMUST00000227729 656 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Gm11661-201ENSMUST00000121761 1327 ntBASIC11.85□□□□□ -0.51
Trim16Q99PP9 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim16Q99PP9 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim16Q99PP9 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim16Q99PP9 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.84□□□□□ -0.51
Trim16Q99PP9 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms