Protein–RNA interactions for Protein: Q99PM3

Gtf2a1, Transcription initiation factor IIA subunit 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2a1Q99PM3 Col9a1-201ENSMUST00000054588 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm45336-201ENSMUST00000210010 3230 ntTSL 5 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Rac2-201ENSMUST00000043214 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 AC154849.3-201ENSMUST00000223733 1660 ntBASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 4933414I15Rik-201ENSMUST00000109123 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Pigc-205ENSMUST00000193784 4207 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm12403-201ENSMUST00000121384 959 ntBASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm17330-201ENSMUST00000221047 165 ntBASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Adamtsl2-201ENSMUST00000091233 3612 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm38271-201ENSMUST00000192296 1603 ntBASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Mfsd2b-201ENSMUST00000045921 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Gm42460-201ENSMUST00000198863 2567 ntBASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Gtf2a1Q99PM3 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Gm26772-201ENSMUST00000180466 3429 ntTSL 5 BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Rgr-203ENSMUST00000225070 4704 ntBASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Gm4899-201ENSMUST00000178708 719 ntBASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Gm18669-201ENSMUST00000216049 778 ntBASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Gripap1-201ENSMUST00000065932 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Gm37608-201ENSMUST00000195696 1880 ntBASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2a1Q99PM3 Tbl3-202ENSMUST00000126319 5226 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Olfr1199-204ENSMUST00000213138 2657 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Ilf3-213ENSMUST00000216892 3684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Hdac9-206ENSMUST00000209990 3072 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Gm11764-201ENSMUST00000120221 623 ntBASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Gm13938-201ENSMUST00000156809 493 ntTSL 5 BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2a1Q99PM3 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms