Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Cdh23Q99PF4 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm9162-201ENSMUST00000182081 991 ntBASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm2594-201ENSMUST00000214774 742 ntBASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm17541-201ENSMUST00000080062 525 ntBASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm23745-201ENSMUST00000104230 125 ntBASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Ptges3l-201ENSMUST00000093933 748 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm20831-201ENSMUST00000177639 1337 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Ssty1-202ENSMUST00000186035 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm20737-202ENSMUST00000187245 1338 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm20777-202ENSMUST00000187434 1341 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm20873-202ENSMUST00000187857 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm23595-201ENSMUST00000104306 130 ntBASIC11.95□□□□□ -0.5
Cdh23Q99PF4 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm26174-201ENSMUST00000158415 219 ntBASIC11.95□□□□□ -0.5
Cdh23Q99PF4 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Gm9644-201ENSMUST00000212828 1183 ntBASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cdh23Q99PF4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm43167-201ENSMUST00000202001 1606 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm14006-201ENSMUST00000122132 981 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Mir8093-201ENSMUST00000185043 137 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm6450-201ENSMUST00000200896 574 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm9791-201ENSMUST00000060997 447 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Prl7b1-201ENSMUST00000080595 925 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Tmem208-202ENSMUST00000098453 950 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm26818-201ENSMUST00000181367 1360 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm13192-201ENSMUST00000101199 208 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm10443-201ENSMUST00000119024 210 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm25830-201ENSMUST00000158923 132 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm29543-201ENSMUST00000188138 967 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm20568-201ENSMUST00000197129 208 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Gm43726-201ENSMUST00000199110 775 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cdh23Q99PF4 AC174797.2-201ENSMUST00000225835 165 ntBASIC11.94□□□□□ -0.5
Cdh23Q99PF4 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms