Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Gm27341-201ENSMUST00000183570 106 ntBASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Gm44967-201ENSMUST00000207047 631 ntBASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tlr3Q99MB1 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tlr3Q99MB1 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC13□□□□□ -0.33
Tlr3Q99MB1 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm18263-201ENSMUST00000220846 1928 ntBASIC13□□□□□ -0.33
Tlr3Q99MB1 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC13□□□□□ -0.33
Tlr3Q99MB1 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Tlr3Q99MB1 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13□□□□□ -0.33
Tlr3Q99MB1 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm14109-201ENSMUST00000118814 309 ntBASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13□□□□□ -0.33
Tlr3Q99MB1 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm27046-201ENSMUST00000182160 463 ntBASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm9230-201ENSMUST00000188228 532 ntBASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm45186-201ENSMUST00000206874 478 ntBASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm9445-201ENSMUST00000207454 1285 ntBASIC13□□□□□ -0.33
Tlr3Q99MB1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC13□□□□□ -0.33
Tlr3Q99MB1 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13□□□□□ -0.33
Tlr3Q99MB1 AC154517.2-201ENSMUST00000220829 2458 ntBASIC13□□□□□ -0.33
Tlr3Q99MB1 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tlr3Q99MB1 Nudt18-202ENSMUST00000228554 3619 ntBASIC13□□□□□ -0.33
Tlr3Q99MB1 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tlr3Q99MB1 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Map1b-203ENSMUST00000223725 2669 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Gm7537-201ENSMUST00000221660 1414 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Gm11439-201ENSMUST00000118598 409 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Gm5070-201ENSMUST00000177599 862 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Mir6979-201ENSMUST00000183927 56 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Gm8885-201ENSMUST00000189382 598 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Gm38317-201ENSMUST00000195564 343 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Gm35960-201ENSMUST00000202712 767 ntBASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tlr3Q99MB1 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms