Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Gm8602-201ENSMUST00000184045 607 ntBASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Gm27731-201ENSMUST00000185192 107 ntBASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cdk5rap3Q99LM2 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Gm13875-201ENSMUST00000120162 282 ntBASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 AC166095.1-201ENSMUST00000223731 1241 ntBASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cdk5rap3Q99LM2 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 Gm2673-201ENSMUST00000120958 1608 ntBASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cdk5rap3Q99LM2 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Cdk5rap3Q99LM2 Gm13316-201ENSMUST00000140537 691 ntBASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms