Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp11Q99K46 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Usp11Q99K46 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Usp11Q99K46 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC12.77□□□□□ -0.36
Usp11Q99K46 Gm43174-201ENSMUST00000195914 2445 ntBASIC12.77□□□□□ -0.37
Usp11Q99K46 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Usp11Q99K46 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.77□□□□□ -0.37
Usp11Q99K46 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
Usp11Q99K46 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.77□□□□□ -0.37
Usp11Q99K46 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.77□□□□□ -0.37
Usp11Q99K46 Gm10371-202ENSMUST00000228010 1081 ntBASIC12.77□□□□□ -0.37
Usp11Q99K46 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.77□□□□□ -0.37
Usp11Q99K46 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.77□□□□□ -0.37
Usp11Q99K46 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.77□□□□□ -0.37
Usp11Q99K46 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Usp11Q99K46 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 AC154517.2-201ENSMUST00000220829 2458 ntBASIC12.77□□□□□ -0.37
Usp11Q99K46 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp11Q99K46 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Usp11Q99K46 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp11Q99K46 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.76□□□□□ -0.37
Usp11Q99K46 Gm12058-201ENSMUST00000118614 437 ntBASIC12.76□□□□□ -0.37
Usp11Q99K46 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC12.76□□□□□ -0.37
Usp11Q99K46 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.76□□□□□ -0.37
Usp11Q99K46 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.76□□□□□ -0.37
Usp11Q99K46 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.76□□□□□ -0.37
Usp11Q99K46 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.76□□□□□ -0.37
Usp11Q99K46 Gm38266-201ENSMUST00000194931 421 ntBASIC12.76□□□□□ -0.37
Usp11Q99K46 Gm43179-201ENSMUST00000198797 275 ntBASIC12.76□□□□□ -0.37
Usp11Q99K46 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.76□□□□□ -0.37
Usp11Q99K46 Gm6007-201ENSMUST00000208170 823 ntBASIC12.76□□□□□ -0.37
Usp11Q99K46 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.76□□□□□ -0.37
Usp11Q99K46 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Usp11Q99K46 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
Usp11Q99K46 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp11Q99K46 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.75□□□□□ -0.37
Usp11Q99K46 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.75□□□□□ -0.37
Usp11Q99K46 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.75□□□□□ -0.37
Usp11Q99K46 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp11Q99K46 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Usp11Q99K46 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.75□□□□□ -0.37
Usp11Q99K46 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms