Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.04□□□□□ -0.64
Lims1Q99JW4 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm8062-201ENSMUST00000139696 444 ntBASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm13316-201ENSMUST00000140537 691 ntBASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.03□□□□□ -0.64
Lims1Q99JW4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm37201-201ENSMUST00000191845 523 ntBASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm17931-201ENSMUST00000208132 634 ntBASIC11.03□□□□□ -0.64
Lims1Q99JW4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.03□□□□□ -0.64
Lims1Q99JW4 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lims1Q99JW4 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.02□□□□□ -0.64
Lims1Q99JW4 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Lims1Q99JW4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Lims1Q99JW4 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.02□□□□□ -0.64
Lims1Q99JW4 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lims1Q99JW4 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lims1Q99JW4 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lims1Q99JW4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lims1Q99JW4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lims1Q99JW4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Lims1Q99JW4 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Lims1Q99JW4 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Lims1Q99JW4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.02□□□□□ -0.65
Lims1Q99JW4 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
Lims1Q99JW4 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.02□□□□□ -0.65
Lims1Q99JW4 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.02□□□□□ -0.65
Lims1Q99JW4 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.02□□□□□ -0.65
Lims1Q99JW4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.02□□□□□ -0.65
Lims1Q99JW4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.02□□□□□ -0.65
Lims1Q99JW4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
Lims1Q99JW4 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.02□□□□□ -0.65
Lims1Q99JW4 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Lims1Q99JW4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Lims1Q99JW4 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms