Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Scp2-ps2-203ENSMUST00000216438 1370 ntBASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb20Q91XZ9 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Prkd3-203ENSMUST00000118991 1265 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm15238-201ENSMUST00000119938 1296 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm12291-201ENSMUST00000121627 311 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm7609-203ENSMUST00000160058 1142 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm23363-201ENSMUST00000175024 79 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Scgb2b1-201ENSMUST00000189372 338 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Olfr1483-ps1-201ENSMUST00000208241 334 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm46136-201ENSMUST00000214730 565 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm5781-201ENSMUST00000219792 443 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm15283-202ENSMUST00000221427 818 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 AC154461.4-201ENSMUST00000224878 468 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 AC131117.2-203ENSMUST00000225886 950 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gm44775-201ENSMUST00000207266 1456 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 A530006G24Rik-201ENSMUST00000152542 1331 ntTSL 2 BASIC12.37□□□□□ -0.43
Pcdhb20Q91XZ9 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Snord83b-201ENSMUST00000104546 94 ntBASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Vps29-203ENSMUST00000118765 713 ntTSL 3 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm15104-201ENSMUST00000132626 842 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Tctex1d2-201ENSMUST00000014220 838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.36□□□□□ -0.43
Pcdhb20Q91XZ9 Gm17061-201ENSMUST00000163167 499 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms