Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pcdhga11Q91XY8 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Gm12058-201ENSMUST00000118614 437 ntBASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Gm8038-201ENSMUST00000164674 2044 ntBASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Pcdhga11Q91XY8 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Gm10434-201ENSMUST00000101158 471 ntBASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Pcdhga11Q91XY8 Gm43133-201ENSMUST00000197472 463 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms