Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Gm9083-201ENSMUST00000120423 819 ntBASIC12.02□□□□□ -0.49
Usb1Q91W78 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Gm42937-201ENSMUST00000197360 752 ntBASIC12.02□□□□□ -0.49
Usb1Q91W78 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Gm9176-201ENSMUST00000219955 1120 ntBASIC12.02□□□□□ -0.49
Usb1Q91W78 AC093022.1-201ENSMUST00000226949 1072 ntBASIC12.02□□□□□ -0.49
Usb1Q91W78 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.02□□□□□ -0.49
Usb1Q91W78 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.02□□□□□ -0.49
Usb1Q91W78 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Usb1Q91W78 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Gm25214-201ENSMUST00000104573 129 ntBASIC12.01□□□□□ -0.49
Usb1Q91W78 Gm12749-201ENSMUST00000122138 1159 ntBASIC12.01□□□□□ -0.49
Usb1Q91W78 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.01□□□□□ -0.49
Usb1Q91W78 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Gm25043-201ENSMUST00000158604 212 ntBASIC12.01□□□□□ -0.49
Usb1Q91W78 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Gm4959-201ENSMUST00000197271 1044 ntBASIC12.01□□□□□ -0.49
Usb1Q91W78 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Gm18615-201ENSMUST00000222919 1031 ntBASIC12.01□□□□□ -0.49
Usb1Q91W78 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.01□□□□□ -0.49
Usb1Q91W78 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Usb1Q91W78 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Usb1Q91W78 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 AC166574.4-201ENSMUST00000227165 1937 ntBASIC12□□□□□ -0.49
Usb1Q91W78 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12□□□□□ -0.49
Usb1Q91W78 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Usb1Q91W78 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 Gm24830-201ENSMUST00000102024 166 ntBASIC12□□□□□ -0.49
Usb1Q91W78 Gm23270-201ENSMUST00000104055 131 ntBASIC12□□□□□ -0.49
Usb1Q91W78 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC12□□□□□ -0.49
Usb1Q91W78 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12□□□□□ -0.49
Usb1Q91W78 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12□□□□□ -0.49
Usb1Q91W78 Gm15276-201ENSMUST00000145953 498 ntBASIC12□□□□□ -0.49
Usb1Q91W78 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC12□□□□□ -0.49
Usb1Q91W78 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms