Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.51□□□□□ -0.41
Trim60Q8VI40 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Gm10434-201ENSMUST00000101158 471 ntBASIC12.51□□□□□ -0.41
Trim60Q8VI40 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Mir1247-201ENSMUST00000116706 82 ntBASIC12.51□□□□□ -0.41
Trim60Q8VI40 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Gm25261-201ENSMUST00000157416 134 ntBASIC12.51□□□□□ -0.41
Trim60Q8VI40 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.51□□□□□ -0.41
Trim60Q8VI40 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.51□□□□□ -0.41
Trim60Q8VI40 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.51□□□□□ -0.41
Trim60Q8VI40 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC12.51□□□□□ -0.41
Trim60Q8VI40 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Gm5706-201ENSMUST00000181525 993 ntBASIC12.5□□□□□ -0.41
Trim60Q8VI40 Gm42937-201ENSMUST00000197360 752 ntBASIC12.5□□□□□ -0.41
Trim60Q8VI40 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.5□□□□□ -0.41
Trim60Q8VI40 AC154671.1-201ENSMUST00000228617 1578 ntBASIC12.5□□□□□ -0.41
Trim60Q8VI40 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trim60Q8VI40 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gm15824-201ENSMUST00000119516 955 ntBASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.49□□□□□ -0.41
Trim60Q8VI40 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim60Q8VI40 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms