Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Rprd1aQ8VDS4 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Gm7993-201ENSMUST00000200970 1384 ntBASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Gm13996-201ENSMUST00000118456 430 ntBASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Gm14017-201ENSMUST00000121934 386 ntBASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Gm29199-201ENSMUST00000187766 775 ntBASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Gm8913-201ENSMUST00000209491 641 ntBASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rprd1aQ8VDS4 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Gm17812-201ENSMUST00000204935 318 ntBASIC12.48□□□□□ -0.41
Rprd1aQ8VDS4 Gm45186-201ENSMUST00000206874 478 ntBASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms