Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Ndc1Q8VCB1 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Gm23119-201ENSMUST00000158610 140 ntBASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Gm27627-201ENSMUST00000183644 150 ntBASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Gm3786-201ENSMUST00000202659 378 ntBASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Gm18730-201ENSMUST00000218038 343 ntBASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Ndc1Q8VCB1 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Ndc1Q8VCB1 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Gm11989-201ENSMUST00000117240 672 ntBASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Gm11362-201ENSMUST00000118838 850 ntBASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Gm12566-201ENSMUST00000121479 359 ntBASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Gm37666-201ENSMUST00000194110 866 ntBASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Gm19994-201ENSMUST00000217086 586 ntBASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 AC159205.5-202ENSMUST00000224849 386 ntBASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Gm26035-201ENSMUST00000083065 308 ntBASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Ndc1Q8VCB1 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms