Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Paupar-201ENSMUST00000194826 3482 ntBASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sf3a1Q8K4Z5 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Gm15808-201ENSMUST00000119046 604 ntBASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Gm12164-201ENSMUST00000121695 551 ntBASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Aprt-ps-201ENSMUST00000212311 505 ntBASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3a1Q8K4Z5 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Gm14130-201ENSMUST00000118417 987 ntBASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Gm13996-201ENSMUST00000118456 430 ntBASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Ighv5-7-201ENSMUST00000192302 244 ntBASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Gm42599-201ENSMUST00000201308 469 ntBASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3a1Q8K4Z5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Gm44262-201ENSMUST00000204969 372 ntBASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3a1Q8K4Z5 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms