Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Gm10434-201ENSMUST00000101158 471 ntBASIC10.78□□□□□ -0.68
ShfQ8CG80 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC10.78□□□□□ -0.68
ShfQ8CG80 Gm15610-201ENSMUST00000120584 195 ntBASIC10.78□□□□□ -0.68
ShfQ8CG80 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Gm17150-201ENSMUST00000165577 381 ntBASIC10.78□□□□□ -0.68
ShfQ8CG80 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC10.78□□□□□ -0.68
ShfQ8CG80 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.78□□□□□ -0.68
ShfQ8CG80 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC10.78□□□□□ -0.68
ShfQ8CG80 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.78□□□□□ -0.68
ShfQ8CG80 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.78□□□□□ -0.68
ShfQ8CG80 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.78□□□□□ -0.68
ShfQ8CG80 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
ShfQ8CG80 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ShfQ8CG80 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.77□□□□□ -0.68
ShfQ8CG80 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.68
ShfQ8CG80 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
ShfQ8CG80 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
ShfQ8CG80 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
ShfQ8CG80 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.77□□□□□ -0.68
ShfQ8CG80 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.77□□□□□ -0.69
ShfQ8CG80 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.77□□□□□ -0.69
ShfQ8CG80 Gm27731-201ENSMUST00000185192 107 ntBASIC10.77□□□□□ -0.69
ShfQ8CG80 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.77□□□□□ -0.69
ShfQ8CG80 CU024892.2-201ENSMUST00000224608 832 ntBASIC10.77□□□□□ -0.69
ShfQ8CG80 Wdyhv1-206ENSMUST00000227142 786 ntBASIC10.77□□□□□ -0.69
ShfQ8CG80 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Gm9996-201ENSMUST00000070359 913 ntBASIC10.77□□□□□ -0.69
ShfQ8CG80 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
ShfQ8CG80 AC114008.2-201ENSMUST00000227699 1347 ntBASIC10.77□□□□□ -0.69
ShfQ8CG80 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Gm9796-201ENSMUST00000062249 2250 ntBASIC10.77□□□□□ -0.69
ShfQ8CG80 Gm13127-201ENSMUST00000118978 1389 ntBASIC10.77□□□□□ -0.69
ShfQ8CG80 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
ShfQ8CG80 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.77□□□□□ -0.69
ShfQ8CG80 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.76□□□□□ -0.69
ShfQ8CG80 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
ShfQ8CG80 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
ShfQ8CG80 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
ShfQ8CG80 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms