Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Gm13369-201ENSMUST00000119442 987 ntBASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Gm11803-201ENSMUST00000119966 444 ntBASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Gm23119-201ENSMUST00000158610 140 ntBASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Gm19163-201ENSMUST00000223313 780 ntBASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Nckap5-212ENSMUST00000162877 2630 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc28bQ8CEG5 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Med19-201ENSMUST00000102645 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gm12203-201ENSMUST00000118235 598 ntBASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gm12209-201ENSMUST00000120089 596 ntBASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gm28911-201ENSMUST00000188837 117 ntBASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Gm10146-201ENSMUST00000072739 309 ntBASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc28bQ8CEG5 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Gm37954-201ENSMUST00000195400 2071 ntBASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Gm45089-201ENSMUST00000208082 2040 ntBASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc28bQ8CEG5 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.95□□□□□ -0.5
Ccdc28bQ8CEG5 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Ccdc28bQ8CEG5 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc28bQ8CEG5 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc28bQ8CEG5 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms