Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gm14130-201ENSMUST00000118417 987 ntBASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gm4909-201ENSMUST00000118749 794 ntBASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gm14109-201ENSMUST00000118814 309 ntBASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gm2260-201ENSMUST00000184965 657 ntBASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 AC123857.2-201ENSMUST00000225756 1582 ntBASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nup88Q8CEC0 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Gm18983-201ENSMUST00000222884 2729 ntBASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Gm11439-201ENSMUST00000118598 409 ntBASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Gm13736-201ENSMUST00000119272 253 ntBASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nup88Q8CEC0 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Gm25043-201ENSMUST00000158604 212 ntBASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Gm27046-201ENSMUST00000182160 463 ntBASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Gm3096-201ENSMUST00000185770 364 ntBASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Gm9678-201ENSMUST00000198979 1149 ntBASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Gm18636-201ENSMUST00000218846 1066 ntBASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Gm45925-201ENSMUST00000218882 744 ntBASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nup88Q8CEC0 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms