Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Gm23912-201ENSMUST00000104687 87 ntBASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Gm42693-201ENSMUST00000196779 631 ntBASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Gm42937-201ENSMUST00000197360 752 ntBASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Gm5781-201ENSMUST00000219792 443 ntBASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Lysmd4Q8CC84 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Gm15991-202ENSMUST00000212123 3565 ntBASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Gm37131-201ENSMUST00000192502 1561 ntBASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Gm24644-201ENSMUST00000157114 139 ntBASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Gm44152-201ENSMUST00000205007 1691 ntBASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC10.82□□□□□ -0.68
Lysmd4Q8CC84 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.81□□□□□ -0.68
Lysmd4Q8CC84 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms