Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Gm7848-201ENSMUST00000210739 718 ntBASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Gm2553-201ENSMUST00000215986 605 ntBASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Mir219a-1-201ENSMUST00000083621 110 ntBASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Gm21811-201ENSMUST00000096485 930 ntBASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 AC159308.2-201ENSMUST00000213592 2325 ntBASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Alx1Q8C8B0 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.07□□□□□ -0.16
Alx1Q8C8B0 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Myl4-202ENSMUST00000106956 900 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Gm11450-201ENSMUST00000121144 333 ntBASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Gm38228-201ENSMUST00000193169 1293 ntBASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Gm2965-201ENSMUST00000198365 343 ntBASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Gm4482-201ENSMUST00000200876 742 ntBASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 AC113082.1-201ENSMUST00000217324 327 ntBASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Alx1Q8C8B0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Mir5120-201ENSMUST00000175020 78 ntBASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Gm8100-201ENSMUST00000182906 988 ntBASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Mir7070-201ENSMUST00000183657 86 ntBASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Gm5733-201ENSMUST00000190232 939 ntBASIC14.06□□□□□ -0.16
Alx1Q8C8B0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Rps4l-202ENSMUST00000204242 789 ntBASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Alx1Q8C8B0 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms