Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Gm8199-201ENSMUST00000121323 823 ntBASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Gm18893-201ENSMUST00000198416 943 ntBASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Sh3rf2Q8BZT2 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Ginm1-202ENSMUST00000065124 300 ntBASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Gm9129-201ENSMUST00000218173 1689 ntBASIC12.26□□□□□ -0.45
Sh3rf2Q8BZT2 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gm11663-201ENSMUST00000117888 290 ntBASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gm11660-201ENSMUST00000120955 412 ntBASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gm13461-201ENSMUST00000120980 662 ntBASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Ighv1-48-201ENSMUST00000191795 294 ntBASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gm45770-201ENSMUST00000212105 616 ntBASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sh3rf2Q8BZT2 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms