Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm13316-201ENSMUST00000140537 691 ntBASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm10608-202ENSMUST00000213924 676 ntBASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm8227-201ENSMUST00000223306 571 ntBASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trerf1Q8BXJ2 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Gm3756-201ENSMUST00000169182 1355 ntBASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Gm13342-201ENSMUST00000121055 207 ntBASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Gm7172-201ENSMUST00000218047 1152 ntBASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Cts7-204ENSMUST00000225321 1257 ntBASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 AC107453.4-201ENSMUST00000227068 1817 ntBASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trerf1Q8BXJ2 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trerf1Q8BXJ2 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms