Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Gm18730-201ENSMUST00000218038 343 ntBASIC12.38□□□□□ -0.43
Nup54Q8BTS4 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Nup54Q8BTS4 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Gm7857-201ENSMUST00000117957 358 ntBASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Gm12036-201ENSMUST00000120008 530 ntBASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Gm8343-201ENSMUST00000182705 994 ntBASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Mir7677-201ENSMUST00000184226 67 ntBASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Gm28450-201ENSMUST00000187349 638 ntBASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Nup54Q8BTS4 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm17040-202ENSMUST00000170597 889 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm27552-201ENSMUST00000183351 62 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm27844-201ENSMUST00000183613 62 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm37466-201ENSMUST00000195692 652 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm43184-201ENSMUST00000197247 542 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Gm4157-201ENSMUST00000211647 679 ntBASIC12.36□□□□□ -0.43
Nup54Q8BTS4 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nup54Q8BTS4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 106.6 ms