Protein–RNA interactions for Protein: Q8BGT7

Smndc1, Survival of motor neuron-related-splicing factor 30, mousemouse

Known RBP Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smndc1Q8BGT7 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Gm7561-201ENSMUST00000211203 886 ntBASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 AC154305.4-201ENSMUST00000224520 614 ntBASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 AC134335.2-201ENSMUST00000227660 440 ntBASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 AC169036.1-201ENSMUST00000227994 296 ntBASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Gm42463-201ENSMUST00000198041 4886 ntBASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Smndc1Q8BGT7 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm24644-201ENSMUST00000157114 139 ntBASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm19184-201ENSMUST00000196798 928 ntBASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm42442-201ENSMUST00000197951 1133 ntBASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm18165-201ENSMUST00000217426 928 ntBASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Smndc1Q8BGT7 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Smndc1Q8BGT7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms