Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Samm50Q8BGH2 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm4366-201ENSMUST00000201488 1342 ntBASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm27320-201ENSMUST00000184892 109 ntBASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm21769-201ENSMUST00000211922 111 ntBASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm30285-201ENSMUST00000214614 422 ntBASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Gm43823-201ENSMUST00000197391 1808 ntBASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Samm50Q8BGH2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 AC126257.2-201ENSMUST00000215507 2300 ntBASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Gm8018-201ENSMUST00000173536 789 ntBASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Gm9361-201ENSMUST00000198695 1507 ntBASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Samm50Q8BGH2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Samm50Q8BGH2 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms