Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Gm8213-201ENSMUST00000118191 441 ntBASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Gm19163-201ENSMUST00000223313 780 ntBASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.29□□□□□ -0.44
TwistnbQ78WZ7 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 AC211878.3-201ENSMUST00000222629 2018 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Gm12203-201ENSMUST00000118235 598 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Gm12036-201ENSMUST00000120008 530 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Gm12209-201ENSMUST00000120089 596 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Gm8810-201ENSMUST00000172895 754 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Gm20949-201ENSMUST00000206478 952 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 BC043934-202ENSMUST00000185694 2356 ntBASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TwistnbQ78WZ7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TwistnbQ78WZ7 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
TwistnbQ78WZ7 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
TwistnbQ78WZ7 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TwistnbQ78WZ7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TwistnbQ78WZ7 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
TwistnbQ78WZ7 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TwistnbQ78WZ7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
TwistnbQ78WZ7 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
TwistnbQ78WZ7 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.27□□□□□ -0.45
TwistnbQ78WZ7 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
TwistnbQ78WZ7 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TwistnbQ78WZ7 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
TwistnbQ78WZ7 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
TwistnbQ78WZ7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TwistnbQ78WZ7 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC12.27□□□□□ -0.45
TwistnbQ78WZ7 Gm12201-201ENSMUST00000120657 1234 ntBASIC12.27□□□□□ -0.45
TwistnbQ78WZ7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms