Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Auts2-212ENSMUST00000178555 309 ntBASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Gm27486-201ENSMUST00000184923 80 ntBASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Gm42937-201ENSMUST00000197360 752 ntBASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Gm10268-201ENSMUST00000085340 555 ntBASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Scaf4Q6PFF0 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Gm27847-201ENSMUST00000183711 107 ntBASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Gm27375-201ENSMUST00000183799 107 ntBASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Gm18584-201ENSMUST00000203098 964 ntBASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 AC154239.3-201ENSMUST00000226933 674 ntBASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Fam210b-201ENSMUST00000028995 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Scaf4Q6PFF0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Scaf4Q6PFF0 Gm8738-201ENSMUST00000172606 329 ntBASIC11.9□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms