Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm43058-201ENSMUST00000197645 625 ntBASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Nup98Q6PFD9 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Gm18642-201ENSMUST00000206642 1400 ntBASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Gm9089-201ENSMUST00000122027 526 ntBASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Gm25517-201ENSMUST00000083865 134 ntBASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Gm43773-201ENSMUST00000198548 2162 ntBASIC14.03□□□□□ -0.16
Nup98Q6PFD9 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nup98Q6PFD9 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Gm3793-201ENSMUST00000204973 672 ntBASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Gm3765-201ENSMUST00000130985 1447 ntBASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.02□□□□□ -0.16
Nup98Q6PFD9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Gm27177-202ENSMUST00000183514 2703 ntBASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nup98Q6PFD9 Gm26013-201ENSMUST00000104404 119 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm14892-201ENSMUST00000117636 267 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm4879-201ENSMUST00000122190 1272 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm17798-201ENSMUST00000182282 1035 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm19015-201ENSMUST00000184002 1189 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm29410-201ENSMUST00000188383 694 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm42518-201ENSMUST00000196277 938 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 AC099645.1-201ENSMUST00000226476 1105 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 AC130823.1-201ENSMUST00000228929 1549 ntBASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nup98Q6PFD9 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 144.6 ms