Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Ccdc85bQ6PDY0 Gm15784-201ENSMUST00000120260 1462 ntBASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Gm11979-201ENSMUST00000119629 743 ntBASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Gm15744-201ENSMUST00000161734 213 ntBASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 AC151275.1-201ENSMUST00000224870 585 ntBASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccdc85bQ6PDY0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccdc85bQ6PDY0 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
Ccdc85bQ6PDY0 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC12.65□□□□□ -0.39
Ccdc85bQ6PDY0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccdc85bQ6PDY0 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
Ccdc85bQ6PDY0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Gm14274-201ENSMUST00000117182 615 ntBASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Gm12218-201ENSMUST00000117666 399 ntBASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Gm4654-201ENSMUST00000183305 982 ntBASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccdc85bQ6PDY0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gm11663-201ENSMUST00000117888 290 ntBASIC12.63□□□□□ -0.39
Ccdc85bQ6PDY0 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms