Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Ttc23-201ENSMUST00000032774 2492 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Olfr1495-203ENSMUST00000216980 2063 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Umad1-201ENSMUST00000159168 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Ddx52-201ENSMUST00000049257 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Rnf220Q6PDX6 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Gm15544-201ENSMUST00000118776 1531 ntBASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Usp11-201ENSMUST00000033383 3467 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Gm16202-201ENSMUST00000117532 544 ntBASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Gm44069-201ENSMUST00000204898 506 ntBASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Gtf3c1-201ENSMUST00000055506 6961 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Rnf220Q6PDX6 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Gm42602-201ENSMUST00000200288 3224 ntBASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Abhd4-201ENSMUST00000041197 2401 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Rnf220Q6PDX6 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Gm6092-201ENSMUST00000121659 2029 ntBASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Mir686-201ENSMUST00000102174 109 ntBASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Gm15429-201ENSMUST00000151268 798 ntBASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Gm37917-201ENSMUST00000194711 392 ntBASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Gm18473-201ENSMUST00000220543 868 ntBASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Rnf220Q6PDX6 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms