Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 AC165351.1-201ENSMUST00000219078 2020 ntBASIC14.32□□□□□ -0.12
Col11a2Q64739 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Cfap61-201ENSMUST00000116398 1561 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Gm7238-201ENSMUST00000206467 973 ntBASIC14.32□□□□□ -0.12
Col11a2Q64739 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Col11a2Q64739 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
Col11a2Q64739 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC14.31□□□□□ -0.12
Col11a2Q64739 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC14.31□□□□□ -0.12
Col11a2Q64739 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Gm13284-201ENSMUST00000121020 547 ntBASIC14.31□□□□□ -0.12
Col11a2Q64739 Ube2d-ps-201ENSMUST00000121354 441 ntBASIC14.31□□□□□ -0.12
Col11a2Q64739 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC14.31□□□□□ -0.12
Col11a2Q64739 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC14.31□□□□□ -0.12
Col11a2Q64739 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC14.31□□□□□ -0.12
Col11a2Q64739 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Gm25569-201ENSMUST00000157175 131 ntBASIC14.31□□□□□ -0.12
Col11a2Q64739 Gm44511-201ENSMUST00000204394 678 ntAPPRIS P5 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Gm44511-202ENSMUST00000204423 678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC14.31□□□□□ -0.12
Col11a2Q64739 Tex30-201ENSMUST00000027215 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Gm6564-201ENSMUST00000075377 619 ntBASIC14.31□□□□□ -0.12
Col11a2Q64739 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col11a2Q64739 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Col11a2Q64739 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC14.31□□□□□ -0.12
Col11a2Q64739 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Col11a2Q64739 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC14.31□□□□□ -0.12
Col11a2Q64739 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Col11a2Q64739 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Col11a2Q64739 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a2Q64739 Gm14005-210ENSMUST00000225087 1413 ntBASIC14.3□□□□□ -0.12
Col11a2Q64739 Gm1840-201ENSMUST00000051687 1432 ntBASIC14.3□□□□□ -0.12
Col11a2Q64739 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a2Q64739 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a2Q64739 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a2Q64739 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Col11a2Q64739 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a2Q64739 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC14.3□□□□□ -0.12
Col11a2Q64739 Gm14071-201ENSMUST00000117817 509 ntBASIC14.3□□□□□ -0.12
Col11a2Q64739 Gm16459-201ENSMUST00000121443 686 ntBASIC14.3□□□□□ -0.12
Col11a2Q64739 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC14.3□□□□□ -0.12
Col11a2Q64739 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.3□□□□□ -0.12
Col11a2Q64739 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a2Q64739 Gm25677-201ENSMUST00000174983 72 ntBASIC14.3□□□□□ -0.12
Col11a2Q64739 Gm11942-201ENSMUST00000180255 345 ntBASIC14.3□□□□□ -0.12
Col11a2Q64739 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC14.3□□□□□ -0.12
Col11a2Q64739 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC14.3□□□□□ -0.12
Col11a2Q64739 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a2Q64739 Gm5513-201ENSMUST00000072982 1218 ntBASIC14.3□□□□□ -0.12
Col11a2Q64739 Aven-202ENSMUST00000099588 791 ntAPPRIS ALT2 TSL 3 BASIC14.3□□□□□ -0.12
Col11a2Q64739 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a2Q64739 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a2Q64739 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col11a2Q64739 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms