Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
Vsx2Q61412 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Vsx2Q61412 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.81□□□□□ -0.52
Vsx2Q61412 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm25668-201ENSMUST00000157700 129 ntBASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm27046-201ENSMUST00000182160 463 ntBASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm28882-201ENSMUST00000185504 314 ntBASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm18304-201ENSMUST00000189162 546 ntBASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm35368-201ENSMUST00000209554 1244 ntTSL 5 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm8712-201ENSMUST00000221090 701 ntBASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm9257-201ENSMUST00000221254 232 ntBASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.81□□□□□ -0.52
Vsx2Q61412 CT009713.10-202ENSMUST00000225734 696 ntBASIC11.81□□□□□ -0.52
Vsx2Q61412 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Vsx2Q61412 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC11.81□□□□□ -0.52
Vsx2Q61412 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.81□□□□□ -0.52
Vsx2Q61412 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Vsx2Q61412 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
Vsx2Q61412 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC11.8□□□□□ -0.52
Vsx2Q61412 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm11930-201ENSMUST00000117788 190 ntBASIC11.8□□□□□ -0.52
Vsx2Q61412 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm9630-201ENSMUST00000178304 885 ntBASIC11.8□□□□□ -0.52
Vsx2Q61412 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Vsx2Q61412 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Vsx2Q61412 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms