Protein–RNA interactions for Protein: Q61045

Sim1, Single-minded homolog 1, mousemouse

Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim1Q61045 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.03□□□□□ -0.48
Sim1Q61045 Gm28882-201ENSMUST00000185504 314 ntBASIC12.03□□□□□ -0.48
Sim1Q61045 Gm29155-201ENSMUST00000185910 269 ntBASIC12.03□□□□□ -0.48
Sim1Q61045 Gm8365-201ENSMUST00000197334 648 ntBASIC12.03□□□□□ -0.48
Sim1Q61045 AC166992.1-201ENSMUST00000216356 565 ntBASIC12.03□□□□□ -0.48
Sim1Q61045 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sim1Q61045 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sim1Q61045 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Sim1Q61045 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sim1Q61045 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Sim1Q61045 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Sim1Q61045 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Sim1Q61045 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Sim1Q61045 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim1Q61045 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim1Q61045 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sim1Q61045 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim1Q61045 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Sim1Q61045 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sim1Q61045 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim1Q61045 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sim1Q61045 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
Sim1Q61045 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim1Q61045 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sim1Q61045 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Sim1Q61045 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Sim1Q61045 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.02□□□□□ -0.49
Sim1Q61045 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.02□□□□□ -0.49
Sim1Q61045 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.02□□□□□ -0.49
Sim1Q61045 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.02□□□□□ -0.49
Sim1Q61045 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC12.02□□□□□ -0.49
Sim1Q61045 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC12.02□□□□□ -0.49
Sim1Q61045 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Sim1Q61045 Gm42937-201ENSMUST00000197360 752 ntBASIC12.02□□□□□ -0.49
Sim1Q61045 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sim1Q61045 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Sim1Q61045 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Sim1Q61045 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.01□□□□□ -0.49
Sim1Q61045 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Sim1Q61045 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.01□□□□□ -0.49
Sim1Q61045 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.01□□□□□ -0.49
Sim1Q61045 Gm12795-201ENSMUST00000117594 539 ntBASIC12.01□□□□□ -0.49
Sim1Q61045 Gm15515-201ENSMUST00000117827 822 ntBASIC12.01□□□□□ -0.49
Sim1Q61045 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC12.01□□□□□ -0.49
Sim1Q61045 Gm11675-201ENSMUST00000121873 832 ntBASIC12.01□□□□□ -0.49
Sim1Q61045 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Gm23119-201ENSMUST00000158610 140 ntBASIC12.01□□□□□ -0.49
Sim1Q61045 Gm17391-201ENSMUST00000171036 126 ntBASIC12.01□□□□□ -0.49
Sim1Q61045 Rn7s6-201ENSMUST00000175005 291 ntBASIC12.01□□□□□ -0.49
Sim1Q61045 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.01□□□□□ -0.49
Sim1Q61045 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Gm1821-202ENSMUST00000227415 750 ntBASIC12.01□□□□□ -0.49
Sim1Q61045 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Sim1Q61045 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms