Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Gm15374-201ENSMUST00000119313 844 ntBASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Eif5a-212ENSMUST00000153652 840 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 2010109A12Rik-201ENSMUST00000031330 549 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Mir9-3hg-202ENSMUST00000181511 3412 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vps13aQ5H8C4 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 4933428M09Rik-201ENSMUST00000113046 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Gm26272-201ENSMUST00000179241 132 ntBASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Kif4-ps-202ENSMUST00000185083 652 ntBASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Gm43966-201ENSMUST00000203301 612 ntBASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 1810059H22Rik-207ENSMUST00000204809 289 ntTSL 3 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 AC125409.3-201ENSMUST00000223488 653 ntBASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 P2rx1-202ENSMUST00000092938 1119 ntTSL 5 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vps13aQ5H8C4 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Vps13aQ5H8C4 Gm14006-201ENSMUST00000122132 981 ntBASIC11.65□□□□□ -0.55
Vps13aQ5H8C4 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Vps13aQ5H8C4 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC11.65□□□□□ -0.55
Vps13aQ5H8C4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Vps13aQ5H8C4 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm13192-201ENSMUST00000101199 208 ntBASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm11475-201ENSMUST00000118482 476 ntBASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm10443-201ENSMUST00000119024 210 ntBASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm20568-201ENSMUST00000197129 208 ntBASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm18256-201ENSMUST00000209087 907 ntBASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 AC152169.1-201ENSMUST00000223901 701 ntBASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm23745-201ENSMUST00000104230 125 ntBASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 Gm13281-201ENSMUST00000120871 567 ntBASIC11.64□□□□□ -0.55
Vps13aQ5H8C4 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms