Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.02□□□□□ -0.33
R3hdm4Q4VBF2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC13.02□□□□□ -0.33
R3hdm4Q4VBF2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
R3hdm4Q4VBF2 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
R3hdm4Q4VBF2 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.02□□□□□ -0.33
R3hdm4Q4VBF2 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.02□□□□□ -0.33
R3hdm4Q4VBF2 Gm28719-201ENSMUST00000187779 1757 ntBASIC13.02□□□□□ -0.33
R3hdm4Q4VBF2 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
R3hdm4Q4VBF2 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
R3hdm4Q4VBF2 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm11439-201ENSMUST00000118598 409 ntBASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm15711-201ENSMUST00000118889 535 ntBASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm24990-201ENSMUST00000157406 323 ntBASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm27530-201ENSMUST00000184096 98 ntBASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm29199-201ENSMUST00000187766 775 ntBASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm17827-201ENSMUST00000211825 742 ntBASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm5847-201ENSMUST00000178959 1595 ntBASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 AC173482.6-201ENSMUST00000225889 1741 ntBASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
R3hdm4Q4VBF2 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Gm5846-201ENSMUST00000193146 1414 ntBASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Gm7537-201ENSMUST00000221660 1414 ntBASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Gm23949-201ENSMUST00000104027 127 ntBASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Gm26286-201ENSMUST00000104166 134 ntBASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Gm11511-201ENSMUST00000118146 540 ntBASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 AC121960.1-201ENSMUST00000227982 564 ntBASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13□□□□□ -0.33
R3hdm4Q4VBF2 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
R3hdm4Q4VBF2 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
R3hdm4Q4VBF2 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms