Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Myo7a-202ENSMUST00000107122 6867 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Tmco3-201ENSMUST00000045229 4335 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Gm19692-201ENSMUST00000203856 2084 ntBASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Gm37969-201ENSMUST00000195777 3409 ntBASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Pcdh15-233ENSMUST00000191709 5346 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Gm7820-201ENSMUST00000121012 1052 ntBASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Gm28659-201ENSMUST00000188013 759 ntBASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Ighv8-10-201ENSMUST00000199579 358 ntBASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 AC138767.1-201ENSMUST00000222661 415 ntBASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Gm30132-201ENSMUST00000212816 8757 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Gm13135-201ENSMUST00000117628 3121 ntBASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Cks1brtQ3UNC9 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 Lysmd4-202ENSMUST00000179106 3319 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1brtQ3UNC9 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Kmt2a-201ENSMUST00000002095 16461 ntAPPRIS P2 TSL 5 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 CT010480.4-201ENSMUST00000224654 2283 ntBASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Gm8410-201ENSMUST00000117225 605 ntBASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Mir8117-201ENSMUST00000184773 107 ntBASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Gm17795-201ENSMUST00000214505 757 ntBASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Gm18165-201ENSMUST00000217426 928 ntBASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms