Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 1700001C02Rik-202ENSMUST00000114743 729 ntTSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm12906-201ENSMUST00000154610 441 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm28937-201ENSMUST00000185413 695 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm29400-201ENSMUST00000187208 695 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm28662-201ENSMUST00000188446 695 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm28251-201ENSMUST00000188835 695 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm37318-201ENSMUST00000194325 695 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm38017-201ENSMUST00000194768 695 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm37287-201ENSMUST00000195449 695 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm37793-201ENSMUST00000195548 695 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm45135-201ENSMUST00000206787 1184 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 AC153152.3-201ENSMUST00000222188 1135 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm6189-201ENSMUST00000164487 2082 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 AC123834.1-201ENSMUST00000225346 2043 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.19□□□□□ -0.14
Col5a2Q3U962 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.19□□□□□ -0.14
Col5a2Q3U962 Gm22846-201ENSMUST00000157706 270 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm5870-201ENSMUST00000196461 282 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm44953-201ENSMUST00000208745 1286 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm18798-201ENSMUST00000187264 1700 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 AC093022.4-203ENSMUST00000228523 2657 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm12179-201ENSMUST00000118344 1272 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm12663-201ENSMUST00000118481 958 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm25998-201ENSMUST00000175397 53 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm9916-201ENSMUST00000192943 1228 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 AC164437.3-201ENSMUST00000228323 347 ntBASIC14.18□□□□□ -0.14
Col5a2Q3U962 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col5a2Q3U962 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a2Q3U962 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a2Q3U962 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a2Q3U962 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a2Q3U962 Gm8899-201ENSMUST00000214635 1332 ntBASIC14.17□□□□□ -0.14
Col5a2Q3U962 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a2Q3U962 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col5a2Q3U962 Gm43447-201ENSMUST00000198471 1535 ntBASIC14.17□□□□□ -0.14
Col5a2Q3U962 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms