Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gm23200-201ENSMUST00000104379 132 ntBASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gm9083-201ENSMUST00000120423 819 ntBASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gm14832-201ENSMUST00000121289 322 ntBASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gm6963-201ENSMUST00000147879 379 ntBASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gm28882-201ENSMUST00000185504 314 ntBASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gabrg3-201ENSMUST00000068394 1724 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Gm10076-201ENSMUST00000073238 384 ntBASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Khdc4Q3TCX3 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Gm14263-201ENSMUST00000117955 746 ntBASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Gm11331-201ENSMUST00000119764 288 ntBASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Gm13315-201ENSMUST00000120376 991 ntBASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Gm43378-201ENSMUST00000199336 582 ntBASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Khdc4Q3TCX3 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Retreg1-206ENSMUST00000228306 1430 ntBASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Gm5863-201ENSMUST00000121760 1008 ntBASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Gm24749-201ENSMUST00000157838 343 ntBASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Khdc4Q3TCX3 Gm39404-201ENSMUST00000216350 313 ntBASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms