Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Gm23931-201ENSMUST00000103842 109 ntBASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Gm38158-201ENSMUST00000194617 339 ntBASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Gm9996-201ENSMUST00000070359 913 ntBASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Cul4aQ3TCH7 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Gm12164-201ENSMUST00000121695 551 ntBASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Gm38241-201ENSMUST00000192641 898 ntBASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Gm17823-201ENSMUST00000217830 1006 ntBASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 CU024892.2-201ENSMUST00000224608 832 ntBASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Cul4aQ3TCH7 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Gm3836-201ENSMUST00000211377 1613 ntBASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 Gm10434-201ENSMUST00000101158 471 ntBASIC12.67□□□□□ -0.38
Cul4aQ3TCH7 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms