Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm4454-201ENSMUST00000190585 2578 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Dspp-201ENSMUST00000112771 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm38227-201ENSMUST00000193036 1602 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Zfp24-201ENSMUST00000066497 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 1810053B23Rik-205ENSMUST00000188056 1592 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Ctnnd1-211ENSMUST00000111685 5985 ntTSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Ctnnd1-215ENSMUST00000111689 5961 ntTSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Gm19445-201ENSMUST00000193649 2438 ntBASIC9.92□□□□□ -0.82
Trim63Q38HM4 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Lama5-201ENSMUST00000015791 11388 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Trim63Q38HM4 Phf20-201ENSMUST00000037401 5737 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Orc3-201ENSMUST00000048706 2300 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm7598-201ENSMUST00000130251 3123 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Ehmt1-210ENSMUST00000147147 5953 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Mdm1-201ENSMUST00000020437 3074 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Cnr2-202ENSMUST00000097843 3867 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Smarcc2-202ENSMUST00000099131 4562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Nrp2-206ENSMUST00000114157 6357 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm21939-201ENSMUST00000221137 2773 ntBASIC9.91□□□□□ -0.82
Trim63Q38HM4 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm13886-201ENSMUST00000117876 1183 ntBASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Mir7036b-201ENSMUST00000184791 63 ntBASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm6550-201ENSMUST00000187574 993 ntBASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm18206-201ENSMUST00000207027 926 ntBASIC9.91□□□□□ -0.82
Trim63Q38HM4 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Diablo-207ENSMUST00000145152 2588 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Greb1-201ENSMUST00000048064 7940 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Tfap2b-201ENSMUST00000027059 5863 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Itga3-202ENSMUST00000107739 4636 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Trim63Q38HM4 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 AC131029.1-201ENSMUST00000226391 2929 ntBASIC9.9□□□□□ -0.82
Trim63Q38HM4 Gm21038-201ENSMUST00000222205 1383 ntBASIC9.9□□□□□ -0.82
Trim63Q38HM4 Cfap61-204ENSMUST00000126415 2256 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Camk2b-210ENSMUST00000109815 3780 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Olfr222-202ENSMUST00000214351 2474 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.9□□□□□ -0.82
Trim63Q38HM4 Gm37389-201ENSMUST00000194885 1568 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms