Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ebf1Q07802 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ebf1Q07802 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ebf1Q07802 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Mir680-2-201ENSMUST00000102163 110 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm23251-201ENSMUST00000103773 110 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm11989-201ENSMUST00000117240 672 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm11362-201ENSMUST00000118838 850 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm11667-201ENSMUST00000119828 486 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm43962-201ENSMUST00000203898 190 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm45219-201ENSMUST00000205602 465 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm8285-201ENSMUST00000208293 759 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 AC135469.1-201ENSMUST00000225984 772 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ebf1Q07802 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Ebf1Q07802 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC12.29□□□□□ -0.44
Ebf1Q07802 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ebf1Q07802 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ebf1Q07802 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.28□□□□□ -0.44
Ebf1Q07802 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm12501-201ENSMUST00000119163 529 ntBASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm8566-201ENSMUST00000120174 465 ntBASIC12.28□□□□□ -0.44
Ebf1Q07802 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC12.28□□□□□ -0.44
Ebf1Q07802 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC12.28□□□□□ -0.44
Ebf1Q07802 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm4482-201ENSMUST00000200876 742 ntBASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm43050-202ENSMUST00000201152 651 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm43916-201ENSMUST00000205062 967 ntBASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm17827-201ENSMUST00000211825 742 ntBASIC12.28□□□□□ -0.44
Ebf1Q07802 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.28□□□□□ -0.44
Ebf1Q07802 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Ebf1Q07802 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ebf1Q07802 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms