Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Smn1P97801 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smn1P97801 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smn1P97801 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smn1P97801 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smn1P97801 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Smn1P97801 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smn1P97801 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Smn1P97801 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smn1P97801 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.35□□□□□ -0.75
Smn1P97801 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smn1P97801 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Gm12502-201ENSMUST00000120197 444 ntBASIC10.35□□□□□ -0.75
Smn1P97801 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.35□□□□□ -0.75
Smn1P97801 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC10.35□□□□□ -0.75
Smn1P97801 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Smn1P97801 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC10.35□□□□□ -0.75
Smn1P97801 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC10.35□□□□□ -0.75
Smn1P97801 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.35□□□□□ -0.75
Smn1P97801 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC10.35□□□□□ -0.75
Smn1P97801 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Dhrs4-202ENSMUST00000226168 828 ntBASIC10.35□□□□□ -0.75
Smn1P97801 AC022775.2-201ENSMUST00000227885 646 ntBASIC10.35□□□□□ -0.75
Smn1P97801 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC10.35□□□□□ -0.75
Smn1P97801 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Smn1P97801 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Smn1P97801 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC10.35□□□□□ -0.75
Smn1P97801 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
Smn1P97801 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Smn1P97801 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Smn1P97801 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Smn1P97801 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.35□□□□□ -0.75
Smn1P97801 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Smn1P97801 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.34□□□□□ -0.75
Smn1P97801 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Smn1P97801 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
Smn1P97801 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC10.34□□□□□ -0.75
Smn1P97801 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Gm6745-201ENSMUST00000199216 526 ntBASIC10.34□□□□□ -0.75
Smn1P97801 Gm44958-201ENSMUST00000203734 736 ntBASIC10.34□□□□□ -0.75
Smn1P97801 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 AC125209.1-201ENSMUST00000225812 766 ntBASIC10.34□□□□□ -0.75
Smn1P97801 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Smn1P97801 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Smn1P97801 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.34□□□□□ -0.75
Smn1P97801 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms