Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Smarcc1P97496 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Gm12816-201ENSMUST00000118069 1212 ntBASIC15.13■□□□□ 0.01
Smarcc1P97496 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC15.13■□□□□ 0.01
Smarcc1P97496 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC15.13■□□□□ 0.01
Smarcc1P97496 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.13■□□□□ 0.01
Smarcc1P97496 Gm37859-201ENSMUST00000195529 2173 ntBASIC15.13■□□□□ 0.01
Smarcc1P97496 Gm43692-201ENSMUST00000198236 1062 ntBASIC15.13■□□□□ 0.01
Smarcc1P97496 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Gm44506-201ENSMUST00000206278 965 ntBASIC15.13■□□□□ 0.01
Smarcc1P97496 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarcc1P97496 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC15.13■□□□□ 0.01
Smarcc1P97496 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Smarcc1P97496 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Smarcc1P97496 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Smarcc1P97496 Kcnk16-202ENSMUST00000225596 2127 ntBASIC15.13■□□□□ 0.01
Smarcc1P97496 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC15.13■□□□□ 0.01
Smarcc1P97496 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm7278-201ENSMUST00000119836 1401 ntBASIC15.12■□□□□ 0.01
Smarcc1P97496 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm12969-201ENSMUST00000120199 1004 ntBASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm14219-201ENSMUST00000120414 288 ntBASIC15.12■□□□□ 0.01
Smarcc1P97496 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm24398-201ENSMUST00000157870 109 ntBASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcc1P97496 AC124433.1-201ENSMUST00000224483 1063 ntBASIC15.12■□□□□ 0.01
Smarcc1P97496 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm4735-201ENSMUST00000138679 1302 ntBASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm5855-201ENSMUST00000200240 1305 ntBASIC15.12■□□□□ 0.01
Smarcc1P97496 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC15.12■□□□□ 0.01
Smarcc1P97496 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Smarcc1P97496 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm37513-201ENSMUST00000194830 2268 ntBASIC15.12■□□□□ 0.01
Smarcc1P97496 Gm38378-201ENSMUST00000195153 2268 ntBASIC15.12■□□□□ 0.01
Smarcc1P97496 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcc1P97496 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Smarcc1P97496 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC15.11■□□□□ 0.01
Smarcc1P97496 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarcc1P97496 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcc1P97496 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC15.11■□□□□ 0.01
Smarcc1P97496 Gm12407-201ENSMUST00000180219 324 ntBASIC15.11■□□□□ 0.01
Smarcc1P97496 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Gm38117-201ENSMUST00000194653 939 ntBASIC15.11■□□□□ 0.01
Smarcc1P97496 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Gm44882-201ENSMUST00000205702 802 ntBASIC15.11■□□□□ 0.01
Smarcc1P97496 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 Gm2553-201ENSMUST00000215986 605 ntBASIC15.11■□□□□ 0.01
Smarcc1P97496 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcc1P97496 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC15.11■□□□□ 0.01
Smarcc1P97496 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarcc1P97496 AC102368.1-201ENSMUST00000227161 892 ntBASIC15.11■□□□□ 0.01
Smarcc1P97496 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Smarcc1P97496 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms