Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Gm7816-201ENSMUST00000119884 1194 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Gm15542-201ENSMUST00000121585 1194 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Lig3P97386 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Lig3P97386 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lig3P97386 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Gm27552-201ENSMUST00000183351 62 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Gm27844-201ENSMUST00000183613 62 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Gm44126-201ENSMUST00000204831 514 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Gm45219-201ENSMUST00000205602 465 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC13.29□□□□□ -0.28
Lig3P97386 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Lig3P97386 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC13.29□□□□□ -0.28
Lig3P97386 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC13.29□□□□□ -0.28
Lig3P97386 Gm8712-201ENSMUST00000221090 701 ntBASIC13.29□□□□□ -0.28
Lig3P97386 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Lig3P97386 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Lig3P97386 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
Lig3P97386 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.28□□□□□ -0.28
Lig3P97386 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.28□□□□□ -0.28
Lig3P97386 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.28□□□□□ -0.28
Lig3P97386 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.28□□□□□ -0.28
Lig3P97386 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.28□□□□□ -0.28
Lig3P97386 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.28□□□□□ -0.28
Lig3P97386 AC126444.1-201ENSMUST00000225938 1768 ntBASIC13.28□□□□□ -0.28
Lig3P97386 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Gm9062-201ENSMUST00000117712 727 ntBASIC13.28□□□□□ -0.28
Lig3P97386 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC13.28□□□□□ -0.28
Lig3P97386 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC13.28□□□□□ -0.28
Lig3P97386 Gm23699-201ENSMUST00000158835 135 ntBASIC13.28□□□□□ -0.28
Lig3P97386 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC13.28□□□□□ -0.28
Lig3P97386 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Lig3P97386 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC13.28□□□□□ -0.28
Lig3P97386 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Gm8913-201ENSMUST00000209491 641 ntBASIC13.28□□□□□ -0.28
Lig3P97386 AC122876.1-201ENSMUST00000217619 825 ntBASIC13.28□□□□□ -0.28
Lig3P97386 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Lig3P97386 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.28□□□□□ -0.28
Lig3P97386 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Lig3P97386 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC13.28□□□□□ -0.28
Lig3P97386 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lig3P97386 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lig3P97386 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.27□□□□□ -0.28
Lig3P97386 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC13.27□□□□□ -0.28
Lig3P97386 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lig3P97386 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lig3P97386 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lig3P97386 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Lig3P97386 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lig3P97386 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lig3P97386 Adra1a-206ENSMUST00000225182 2337 ntBASIC13.27□□□□□ -0.28
Lig3P97386 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lig3P97386 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lig3P97386 Snord83b-201ENSMUST00000104546 94 ntBASIC13.27□□□□□ -0.29
Lig3P97386 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lig3P97386 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.27□□□□□ -0.29
Lig3P97386 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Lig3P97386 Gm17040-202ENSMUST00000170597 889 ntBASIC13.27□□□□□ -0.29
Lig3P97386 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lig3P97386 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lig3P97386 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Lig3P97386 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Lig3P97386 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Lig3P97386 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lig3P97386 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Lig3P97386 AC101945.2-201ENSMUST00000227886 1377 ntBASIC13.27□□□□□ -0.29
Lig3P97386 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lig3P97386 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lig3P97386 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lig3P97386 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lig3P97386 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.27□□□□□ -0.29
Lig3P97386 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lig3P97386 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.27□□□□□ -0.29
Lig3P97386 Gm43045-201ENSMUST00000198725 2095 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms