Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 AC126257.1-201ENSMUST00000213195 1536 ntBASIC10.04□□□□□ -0.8
Ccl21aP84444 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Gm13019-201ENSMUST00000120000 276 ntBASIC10.04□□□□□ -0.8
Ccl21aP84444 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Gm9507-202ENSMUST00000180157 654 ntBASIC10.04□□□□□ -0.8
Ccl21aP84444 Gm9916-201ENSMUST00000192943 1228 ntBASIC10.04□□□□□ -0.8
Ccl21aP84444 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Gm6390-201ENSMUST00000215034 589 ntBASIC10.04□□□□□ -0.8
Ccl21aP84444 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC10.04□□□□□ -0.8
Ccl21aP84444 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Ccl21aP84444 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC10.04□□□□□ -0.8
Ccl21aP84444 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm11560-201ENSMUST00000117567 948 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm11578-201ENSMUST00000118530 459 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm9089-201ENSMUST00000122027 526 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm22379-201ENSMUST00000157480 131 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm22846-201ENSMUST00000157706 270 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm8574-201ENSMUST00000203207 924 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm29763-201ENSMUST00000205306 616 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm18561-201ENSMUST00000206027 804 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC10.03□□□□□ -0.8
Ccl21aP84444 AC112945.1-201ENSMUST00000226413 514 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Olfr584-201ENSMUST00000098210 964 ntBASIC10.03□□□□□ -0.8
Ccl21aP84444 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC10.03□□□□□ -0.8
Ccl21aP84444 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Gm12198-201ENSMUST00000154068 1809 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ccl21aP84444 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl21aP84444 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl21aP84444 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl21aP84444 AC129931.1-201ENSMUST00000228865 1861 ntBASIC10.02□□□□□ -0.8
Ccl21aP84444 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC10.02□□□□□ -0.8
Ccl21aP84444 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ccl21aP84444 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ccl21aP84444 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms