Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.48□□□□□ -0.73
Atf1P81269 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Atf1P81269 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Atf1P81269 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Atf1P81269 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Atf1P81269 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Atf1P81269 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Atf1P81269 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.48□□□□□ -0.73
Atf1P81269 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Atf1P81269 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Atf1P81269 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Atf1P81269 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Atf1P81269 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Atf1P81269 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Atf1P81269 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.47□□□□□ -0.73
Atf1P81269 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.47□□□□□ -0.73
Atf1P81269 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.47□□□□□ -0.73
Atf1P81269 Gm4986-201ENSMUST00000119731 549 ntBASIC10.47□□□□□ -0.73
Atf1P81269 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC10.47□□□□□ -0.73
Atf1P81269 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC10.47□□□□□ -0.73
Atf1P81269 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Rprl1-201ENSMUST00000158050 327 ntBASIC10.47□□□□□ -0.73
Atf1P81269 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.47□□□□□ -0.73
Atf1P81269 Gm38002-201ENSMUST00000193255 180 ntBASIC10.47□□□□□ -0.73
Atf1P81269 Gm43433-201ENSMUST00000196573 481 ntBASIC10.47□□□□□ -0.73
Atf1P81269 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC10.47□□□□□ -0.73
Atf1P81269 Gm43172-201ENSMUST00000202139 2137 ntBASIC10.47□□□□□ -0.73
Atf1P81269 Gm19309-201ENSMUST00000218295 205 ntBASIC10.47□□□□□ -0.73
Atf1P81269 AC153929.1-201ENSMUST00000219009 303 ntBASIC10.47□□□□□ -0.73
Atf1P81269 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Atf1P81269 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Atf1P81269 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 AC108858.2-201ENSMUST00000228186 1425 ntBASIC10.47□□□□□ -0.73
Atf1P81269 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.47□□□□□ -0.73
Atf1P81269 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 AC154671.1-201ENSMUST00000228617 1578 ntBASIC10.47□□□□□ -0.73
Atf1P81269 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
Atf1P81269 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Atf1P81269 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Atf1P81269 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.73
Atf1P81269 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Atf1P81269 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Atf1P81269 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.46□□□□□ -0.73
Atf1P81269 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Atf1P81269 Gm14832-201ENSMUST00000121289 322 ntBASIC10.46□□□□□ -0.73
Atf1P81269 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 Gm24845-201ENSMUST00000158034 109 ntBASIC10.46□□□□□ -0.73
Atf1P81269 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.46□□□□□ -0.73
Atf1P81269 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Atf1P81269 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC10.46□□□□□ -0.73
Atf1P81269 Gm44711-201ENSMUST00000205414 1264 ntBASIC10.46□□□□□ -0.73
Atf1P81269 Gm45880-201ENSMUST00000213041 853 ntBASIC10.46□□□□□ -0.73
Atf1P81269 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC10.46□□□□□ -0.73
Atf1P81269 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC10.46□□□□□ -0.73
Atf1P81269 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.46□□□□□ -0.73
Atf1P81269 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.74
Atf1P81269 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Atf1P81269 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Atf1P81269 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC10.46□□□□□ -0.74
Atf1P81269 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Atf1P81269 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Atf1P81269 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.46□□□□□ -0.74
Atf1P81269 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Atf1P81269 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.46□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms